IL_6V3B_126

3D structure

PDB id

6V3B (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the Acinetobacter baumannii Ribosome: 70S in Empty state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.91 Å

Loop

Sequence

GGAU*GAC

Length

7 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6V3B_126 not in the Motif Atlas

Geometric match to IL_8B0X_006

Geometric discrepancy: 0.3863

The information below is about IL_8B0X_006

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_82096.1

Basepair signature

cWW-L-R-L-cWW

Number of instances in this motif group

6

Unit IDs

6V3B|1|sN1|G|199
6V3B|1|sN1|G|200
6V3B|1|sN1|A|201
6V3B|1|sN1|U|202
*
6V3B|1|sN1|G|208
6V3B|1|sN1|A|209
6V3B|1|sN1|C|210

Current chains

Chain sN1

16s Ribosomal RNA

Nearby chains