IL_6V3B_175

3D structure

PDB id

6V3B (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the Acinetobacter baumannii Ribosome: 70S in Empty state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.91 Å

Loop

Sequence

GUC*GUC

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6V3B_175 not in the Motif Atlas

Geometric match to IL_4V88_417

Geometric discrepancy: 0.2031

The information below is about IL_4V88_417

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_44258.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

301

Unit IDs

6V3B|1|sN1|G|1402
6V3B|1|sN1|U|1403
6V3B|1|sN1|C|1404
*
6V3B|1|sN1|G|1491
6V3B|1|sN1|U|1492
6V3B|1|sN1|C|1493

Current chains

Chain sN1

16s Ribosomal RNA

Nearby chains