IL_6V3B_182

3D structure

PDB id

6V3B (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the Acinetobacter baumannii Ribosome: 70S in Empty state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.91 Å

Loop

Sequence

CUAG*CGG

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6V3B_182 not in the Motif Atlas

Geometric match to IL_6DME_003

Geometric discrepancy: 0.2729

The information below is about IL_6DME_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_75527.2

Basepair signature

cWW-cWW-cSH-cWW

Number of instances in this motif group

10

Unit IDs

6V3B|1|sN1|C|1436
6V3B|1|sN1|U|1437
6V3B|1|sN1|A|1438
6V3B|1|sN1|G|1439
*
6V3B|1|sN1|C|1457
6V3B|1|sN1|G|1458
6V3B|1|sN1|G|1459

Current chains

Chain sN1

16s Ribosomal RNA

Nearby chains

Chain O

50S ribosomal protein L19

Chain t

30S ribosomal protein S20