IL_6V3E_038

3D structure

PDB id

6V3E (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the Acinetobacter baumannii Ribosome: 30S subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

4.4 Å

Loop

Sequence

GGG*UU

Length

5 nucleotides

Bulged bases

6V3E|1|sN1|G|923

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6V3E_038 not in the Motif Atlas

Homologous match to IL_6CZR_148

Geometric discrepancy: 0.2747

The information below is about IL_6CZR_148

Detailed Annotation

Single bulged G

Broad Annotation

No text annotation

Motif group

IL_00225.12

Basepair signature

cWW-L-cWW

Number of instances in this motif group

52

Unit IDs

6V3E|1|sN1|G|922
6V3E|1|sN1|G|923
6V3E|1|sN1|G|924
*
6V3E|1|sN1|U|1387
6V3E|1|sN1|U|1388

Current chains

Chain sN1

16s Ribosomal RNA

Nearby chains