IL_6VLZ_056
3D structure
- PDB id
- 6VLZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the human mitochondrial ribosome-EF-G1 complex (ClassI)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.97 Å
Loop
- Sequence
- AA*UAU
- Length
- 5 nucleotides
- Bulged bases
- 6VLZ|1|AA|A|860
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6VLZ_056 not in the Motif Atlas
- Homologous match to IL_4LFB_002
- Geometric discrepancy: 0.5108
- The information below is about IL_4LFB_002
- Detailed Annotation
- Single bulged A
- Broad Annotation
- No text annotation
- Motif group
- IL_14190.2
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 160
Unit IDs
6VLZ|1|AA|A|685
6VLZ|1|AA|A|686
*
6VLZ|1|AA|U|859
6VLZ|1|AA|A|860
6VLZ|1|AA|U|861
Current chains
- Chain AA
- 12s rRNA
Nearby chains
- Chain AM
- 28S ribosomal protein S16, mitochondrial
- Chain AO
- 28S ribosomal protein S18b, mitochondrial
- Chain AT
- 28S ribosomal protein S25, mitochondrial
- Chain v
- Elongation factor G, mitochondrial
Coloring options: