IL_6VLZ_067
3D structure
- PDB id
- 6VLZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the human mitochondrial ribosome-EF-G1 complex (ClassI)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.97 Å
Loop
- Sequence
- UGGUCAAUUU*AUUA
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6VLZ_067 not in the Motif Atlas
- Geometric match to IL_5EW4_001
- Geometric discrepancy: 0.2728
- The information below is about IL_5EW4_001
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_76776.2
- Basepair signature
- cWW-cWW-L-R-cWW
- Number of instances in this motif group
- 5
Unit IDs
6VLZ|1|AA|U|876
6VLZ|1|AA|G|877
6VLZ|1|AA|G|878
6VLZ|1|AA|U|879
6VLZ|1|AA|C|880
6VLZ|1|AA|A|881
6VLZ|1|AA|A|882
6VLZ|1|AA|U|883
6VLZ|1|AA|U|884
6VLZ|1|AA|U|885
*
6VLZ|1|AA|A|910
6VLZ|1|AA|U|911
6VLZ|1|AA|U|912
6VLZ|1|AA|A|913
Current chains
- Chain AA
- 12s rRNA
Nearby chains
- Chain AD
- 28S ribosomal protein S5, mitochondrial
- Chain AJ
- 28S ribosomal protein S12, mitochondrial
- Chain AO
- 28S ribosomal protein S18b, mitochondrial
- Chain AZ
- 28S ribosomal protein S33, mitochondrial
Coloring options: