IL_6VLZ_070
3D structure
- PDB id
- 6VLZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the human mitochondrial ribosome-EF-G1 complex (ClassI)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.97 Å
Loop
- Sequence
- UUUUA*UGAACA
- Length
- 11 nucleotides
- Bulged bases
- 6VLZ|1|AA|A|1047
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6VLZ_070 not in the Motif Atlas
- Homologous match to IL_5J7L_027
- Geometric discrepancy: 0.5893
- The information below is about IL_5J7L_027
- Detailed Annotation
- tSH-tHW-tHS
- Broad Annotation
- No text annotation
- Motif group
- IL_17136.7
- Basepair signature
- cWW-tSH-tHW-tHS-cWW
- Number of instances in this motif group
- 14
Unit IDs
6VLZ|1|AA|U|946
6VLZ|1|AA|U|947
6VLZ|1|AA|U|948
6VLZ|1|AA|U|949
6VLZ|1|AA|A|950
*
6VLZ|1|AA|U|1044
6VLZ|1|AA|G|1045
6VLZ|1|AA|A|1046
6VLZ|1|AA|A|1047
6VLZ|1|AA|C|1048
6VLZ|1|AA|A|1049
Current chains
- Chain AA
- 12s rRNA
Nearby chains
- Chain AJ
- 28S ribosomal protein S12, mitochondrial
- Chain AL
- 28S ribosomal protein S15, mitochondrial
- Chain AN
- 28S ribosomal protein S17, mitochondrial
- Chain AT
- 28S ribosomal protein S25, mitochondrial
Coloring options: