IL_6VLZ_084

3D structure

PDB id

6VLZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the human mitochondrial ribosome-EF-G1 complex (ClassI)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.97 Å

Loop

Sequence

CUUGCUCAG*CCCAUG

Length

15 nucleotides

Bulged bases

6VLZ|1|AA|C|1248, 6VLZ|1|AA|U|1249, 6VLZ|1|AA|C|1250, 6VLZ|1|AA|U|1344

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6VLZ|1|AA|C|1244
6VLZ|1|AA|U|1245
6VLZ|1|AA|U|1246
6VLZ|1|AA|G|1247
6VLZ|1|AA|C|1248
6VLZ|1|AA|U|1249
6VLZ|1|AA|C|1250
6VLZ|1|AA|A|1251
6VLZ|1|AA|G|1252
*
6VLZ|1|AA|C|1340
6VLZ|1|AA|C|1341
6VLZ|1|AA|C|1342
6VLZ|1|AA|A|1343
6VLZ|1|AA|U|1344
6VLZ|1|AA|G|1345

Current chains

Chain AA

12s rRNA

Nearby chains

Chain AD

28S ribosomal protein S5, mitochondrial

Chain AK

28S ribosomal protein S14, mitochondrial

Chain AZ

28S ribosomal protein S33, mitochondrial