IL_6VLZ_093

3D structure

PDB id

6VLZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the human mitochondrial ribosome-EF-G1 complex (ClassI)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.97 Å

Loop

Sequence

GC*GUC

Length

5 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6VLZ_093 not in the Motif Atlas

Geometric match to IL_7RQB_058

Geometric discrepancy: 0.2606

The information below is about IL_7RQB_058

Detailed Annotation

Single stack bend

Broad Annotation

Single stack bend

Motif group

IL_76488.4

Basepair signature

cWW-L-cWW

Number of instances in this motif group

36

Unit IDs

6VLZ|1|AA|G|1393
6VLZ|1|AA|C|1394
*
6VLZ|1|AA|G|1412
6VLZ|1|AA|U|1413
6VLZ|1|AA|C|1414

Current chains

Chain AA

12s rRNA

Nearby chains

Chain AX

28S ribosomal protein S29, mitochondrial