3D structure

PDB id
6VLZ (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the human mitochondrial ribosome-EF-G1 complex (ClassI)
Experimental method
ELECTRON MICROSCOPY
Resolution
2.97 Å

Loop

Sequence
GCCCA*UACCCUCAC
Length
14 nucleotides
Bulged bases
6VLZ|1|A|C|2414, 6VLZ|1|A|C|2415, 6VLZ|1|A|U|2416, 6VLZ|1|A|C|2417
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6VLZ|1|A|G|2377
6VLZ|1|A|C|2378
6VLZ|1|A|C|2379
6VLZ|1|A|C|2380
6VLZ|1|A|A|2381
*
6VLZ|1|A|U|2411
6VLZ|1|A|A|2412
6VLZ|1|A|C|2413
6VLZ|1|A|C|2414
6VLZ|1|A|C|2415
6VLZ|1|A|U|2416
6VLZ|1|A|C|2417
6VLZ|1|A|A|2418
6VLZ|1|A|C|2419

Current chains

Chain A
16s rRNA

Nearby chains

Chain 5
39S ribosomal protein L37, mitochondrial
Chain 9
39S ribosomal protein L41, mitochondrial
Chain U
39S ribosomal protein L23, mitochondrial
Chain s
39S ribosomal protein S30, mitochondrial

Coloring options:

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