3D structure

PDB id
6VLZ (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the human mitochondrial ribosome-EF-G1 complex (ClassI)
Experimental method
ELECTRON MICROSCOPY
Resolution
2.97 Å

Loop

Sequence
AUCUACAAUCAACCAAC*GUCAUU
Length
23 nucleotides
Bulged bases
6VLZ|1|A|A|2388, 6VLZ|1|A|C|2389, 6VLZ|1|A|C|2393, 6VLZ|1|A|A|2406
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6VLZ|1|A|A|2384
6VLZ|1|A|U|2385
6VLZ|1|A|C|2386
6VLZ|1|A|U|2387
6VLZ|1|A|A|2388
6VLZ|1|A|C|2389
6VLZ|1|A|A|2390
6VLZ|1|A|A|2391
6VLZ|1|A|U|2392
6VLZ|1|A|C|2393
6VLZ|1|A|A|2394
6VLZ|1|A|A|2395
6VLZ|1|A|C|2396
6VLZ|1|A|C|2397
6VLZ|1|A|A|2398
6VLZ|1|A|A|2399
6VLZ|1|A|C|2400
*
6VLZ|1|A|G|2403
6VLZ|1|A|U|2404
6VLZ|1|A|C|2405
6VLZ|1|A|A|2406
6VLZ|1|A|U|2407
6VLZ|1|A|U|2408

Current chains

Chain A
16s rRNA

Nearby chains

Chain 5
39S ribosomal protein L37, mitochondrial
Chain D
39S ribosomal protein L2, mitochondrial
Chain s
39S ribosomal protein S30, mitochondrial

Coloring options:

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