IL_6VLZ_113
3D structure
- PDB id
- 6VLZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the human mitochondrial ribosome-EF-G1 complex (ClassI)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.97 Å
Loop
- Sequence
- UAUACCG*UCAAGGUG
- Length
- 15 nucleotides
- Bulged bases
- 6VLZ|1|AA|U|1259, 6VLZ|1|AA|A|1331
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6VLZ_113 not in the Motif Atlas
- Geometric match to IL_4V88_510
- Geometric discrepancy: 0.3553
- The information below is about IL_4V88_510
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_62984.1
- Basepair signature
- cWW-tHS-tWH-cWH-cWW-L-L-cWW
- Number of instances in this motif group
- 1
Unit IDs
6VLZ|1|AA|U|1257
6VLZ|1|AA|A|1258
6VLZ|1|AA|U|1259
6VLZ|1|AA|A|1260
6VLZ|1|AA|C|1261
6VLZ|1|AA|C|1262
6VLZ|1|AA|G|1263
*
6VLZ|1|AA|U|1329
6VLZ|1|AA|C|1330
6VLZ|1|AA|A|1331
6VLZ|1|AA|A|1332
6VLZ|1|AA|G|1333
6VLZ|1|AA|G|1334
6VLZ|1|AA|U|1335
6VLZ|1|AA|G|1336
Current chains
- Chain AA
- 12s rRNA
Nearby chains
- Chain AC
- 28S ribosomal protein S24, mitochondrial
- Chain AD
- 28S ribosomal protein S5, mitochondrial
- Chain AH
- 28S ribosomal protein S10, mitochondrial
- Chain AK
- 28S ribosomal protein S14, mitochondrial
- Chain AZ
- 28S ribosomal protein S33, mitochondrial
Coloring options: