IL_6VMI_022

3D structure

PDB id

6VMI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the human mitochondrial ribosome-EF-G1 complex (ClassIII)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.96 Å

Loop

Sequence

GAUUAAA*UGAAC

Length

12 nucleotides

Bulged bases

6VMI|1|A|A|2362, 6VMI|1|A|A|2363

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6VMI|1|A|G|2349
6VMI|1|A|A|2350
6VMI|1|A|U|2351
6VMI|1|A|U|2352
6VMI|1|A|A|2353
6VMI|1|A|A|2354
6VMI|1|A|A|2355
*
6VMI|1|A|U|2360
6VMI|1|A|G|2361
6VMI|1|A|A|2362
6VMI|1|A|A|2363
6VMI|1|A|C|2364

Current chains

Chain A

16s rRNA

Nearby chains

Chain T

39S ribosomal protein L22, mitochondrial

Chain U

39S ribosomal protein L23, mitochondrial

Chain d

39S ribosomal protein L45, mitochondrial

Chain s

39S ribosomal protein S30, mitochondrial