IL_6VMI_079

3D structure

PDB id

6VMI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the human mitochondrial ribosome-EF-G1 complex (ClassIII)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.96 Å

Loop

Sequence

AACACUACG*UAAAACU

Length

16 nucleotides

Bulged bases

6VMI|1|AA|C|1143

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6VMI|1|AA|A|1139
6VMI|1|AA|A|1140
6VMI|1|AA|C|1141
6VMI|1|AA|A|1142
6VMI|1|AA|C|1143
6VMI|1|AA|U|1144
6VMI|1|AA|A|1145
6VMI|1|AA|C|1146
6VMI|1|AA|G|1147
*
6VMI|1|AA|U|1158
6VMI|1|AA|A|1159
6VMI|1|AA|A|1160
6VMI|1|AA|A|1161
6VMI|1|AA|A|1162
6VMI|1|AA|C|1163
6VMI|1|AA|U|1164

Current chains

Chain AA

12s rRNA

Nearby chains

Chain A3

Aurora kinase A-interacting protein

Chain AJ

28S ribosomal protein S12, mitochondrial

Chain AL

28S ribosomal protein S15, mitochondrial