IL_6VMI_115

3D structure

PDB id

6VMI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the human mitochondrial ribosome-EF-G1 complex (ClassIII)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.96 Å

Loop

Sequence

AUAUACCG*UCAAGGUGU

Length

17 nucleotides

Bulged bases

6VMI|1|AA|U|1259, 6VMI|1|AA|A|1331

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6VMI|1|AA|A|1256
6VMI|1|AA|U|1257
6VMI|1|AA|A|1258
6VMI|1|AA|U|1259
6VMI|1|AA|A|1260
6VMI|1|AA|C|1261
6VMI|1|AA|C|1262
6VMI|1|AA|G|1263
*
6VMI|1|AA|U|1329
6VMI|1|AA|C|1330
6VMI|1|AA|A|1331
6VMI|1|AA|A|1332
6VMI|1|AA|G|1333
6VMI|1|AA|G|1334
6VMI|1|AA|U|1335
6VMI|1|AA|G|1336
6VMI|1|AA|U|1337

Current chains

Chain AA

12s rRNA

Nearby chains

Chain AC

28S ribosomal protein S24, mitochondrial

Chain AD

28S ribosomal protein S5, mitochondrial

Chain AH

28S ribosomal protein S10, mitochondrial

Chain AK

28S ribosomal protein S14, mitochondrial

Chain AZ

28S ribosomal protein S33, mitochondrial