IL_6VMI_120

3D structure

PDB id

6VMI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the human mitochondrial ribosome-EF-G1 complex (ClassIII)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.96 Å

Loop

Sequence

AUAUC*GCCCU

Length

10 nucleotides

Bulged bases

6VMI|1|AA|A|1188, 6VMI|1|AA|C|1466

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6VMI|1|AA|A|1186
6VMI|1|AA|U|1187
6VMI|1|AA|A|1188
6VMI|1|AA|U|1189
6VMI|1|AA|C|1190
*
6VMI|1|AA|G|1464
6VMI|1|AA|C|1465
6VMI|1|AA|C|1466
6VMI|1|AA|C|1467
6VMI|1|AA|U|1468

Current chains

Chain AA

12s rRNA

Nearby chains

Chain A2

Coiled-coil-helix-coiled-coil-helix domain-containing protein 1

Chain AF

28S ribosomal protein S7, mitochondrial

Chain AG

28S ribosomal protein S9, mitochondrial