IL_6VU3_190

3D structure

PDB id

6VU3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of Escherichia coli transcription-translation complex A (TTC-A) containing mRNA with a 12 nt long spacer

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GGGGGAUAAC*GCUAAUACCGC

Length

21 nucleotides

Bulged bases

6VU3|1|D|U|173

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6VU3|1|D|G|144
6VU3|1|D|G|145
6VU3|1|D|G|146
6VU3|1|D|G|147
6VU3|1|D|G|148
6VU3|1|D|A|149
6VU3|1|D|U|150
6VU3|1|D|A|151
6VU3|1|D|A|152
6VU3|1|D|C|153
*
6VU3|1|D|G|168
6VU3|1|D|C|169
6VU3|1|D|U|170
6VU3|1|D|A|171
6VU3|1|D|A|172
6VU3|1|D|U|173
6VU3|1|D|A|174
6VU3|1|D|C|175
6VU3|1|D|C|176
6VU3|1|D|G|177
6VU3|1|D|C|178

Current chains

Chain D

16S rRNA

Nearby chains

Chain E

30S ribosomal protein S20