IL_6VWL_074

3D structure

PDB id

6VWL (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome bound to HIV frameshifting stem-loop (FSS) and P/E tRNA (rotated conformation)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CCUGAAUC*GUGAG

Length

13 nucleotides

Bulged bases

6VWL|1|2|G|277, 6VWL|1|2|A|278

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6VWL|1|2|C|274
6VWL|1|2|C|275
6VWL|1|2|U|276
6VWL|1|2|G|277
6VWL|1|2|A|278
6VWL|1|2|A|279
6VWL|1|2|U|280
6VWL|1|2|C|281
*
6VWL|1|2|G|359
6VWL|1|2|U|360
6VWL|1|2|G|361
6VWL|1|2|A|362
6VWL|1|2|G|363

Current chains

Chain 2

23S ribosomal RNA

Nearby chains