IL_6VWL_128
3D structure
- PDB id
- 6VWL (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome bound to HIV frameshifting stem-loop (FSS) and P/E tRNA (rotated conformation)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- UGAGGUC*GAUGGAG
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6VWL|1|2|U|1720
6VWL|1|2|G|1721
6VWL|1|2|A|1722
6VWL|1|2|G|1723
6VWL|1|2|G|1724
6VWL|1|2|U|1725
6VWL|1|2|C|1726
*
6VWL|1|2|G|1734
6VWL|1|2|A|1735
6VWL|1|2|U|1736
6VWL|1|2|G|1737
6VWL|1|2|G|1738
6VWL|1|2|A|1739
6VWL|1|2|G|1740
Current chains
- Chain 2
- 23S ribosomal RNA
Nearby chains
No other chains within 10ÅColoring options: