IL_6VWM_012
3D structure
- PDB id
- 6VWM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome bound to HIV frameshifting stem-loop (FSS) and P-site tRNA (non-rotated conformation, Structure I)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- GGAUAACU*AGCUAAUAC
- Length
- 17 nucleotides
- Bulged bases
- 6VWM|1|1|U|173
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6VWM|1|1|G|147
6VWM|1|1|G|148
6VWM|1|1|A|149
6VWM|1|1|U|150
6VWM|1|1|A|151
6VWM|1|1|A|152
6VWM|1|1|C|153
6VWM|1|1|U|154
*
6VWM|1|1|A|167
6VWM|1|1|G|168
6VWM|1|1|C|169
6VWM|1|1|U|170
6VWM|1|1|A|171
6VWM|1|1|A|172
6VWM|1|1|U|173
6VWM|1|1|A|174
6VWM|1|1|C|175
Current chains
- Chain 1
- 16S ribosomal RNA
Nearby chains
- Chain s
- 30S ribosomal protein S20
Coloring options: