IL_6VYR_190

3D structure

PDB id

6VYR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli transcription-translation complex A1 (TTC-A1) containing an 18 nt long mRNA spacer, NusG, and fMet-tRNAs at E-site and P-site

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GGGGGAUAAC*GCUAAUACCGC

Length

21 nucleotides

Bulged bases

6VYR|1|D|U|173

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6VYR|1|D|G|144
6VYR|1|D|G|145
6VYR|1|D|G|146
6VYR|1|D|G|147
6VYR|1|D|G|148
6VYR|1|D|A|149
6VYR|1|D|U|150
6VYR|1|D|A|151
6VYR|1|D|A|152
6VYR|1|D|C|153
*
6VYR|1|D|G|168
6VYR|1|D|C|169
6VYR|1|D|U|170
6VYR|1|D|A|171
6VYR|1|D|A|172
6VYR|1|D|U|173
6VYR|1|D|A|174
6VYR|1|D|C|175
6VYR|1|D|C|176
6VYR|1|D|G|177
6VYR|1|D|C|178

Current chains

Chain D

16S rRNA

Nearby chains

Chain E

30S ribosomal protein S20