IL_6W6K_061

3D structure

PDB id

6W6K (explore in PDB, NAKB, or RNA 3D Hub)

Description

30S-Activated-high-Mg2+

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CACA*UGAAG

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6W6K_061 not in the Motif Atlas

Geometric match to IL_8C3A_473

Geometric discrepancy: 0.368

The information below is about IL_8C3A_473

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_50458.2

Basepair signature

cWW-cWW-L-R-L-cWW

Number of instances in this motif group

4

Unit IDs

6W6K|1|A|C|1407
6W6K|1|A|A|1408
6W6K|1|A|C|1409
6W6K|1|A|A|1410
*
6W6K|1|A|U|1490
6W6K|1|A|G|1491
6W6K|1|A|A|1492
6W6K|1|A|A|1493
6W6K|1|A|G|1494

Current chains

Chain A

16S rRNA

Nearby chains

Chain L

30S ribosomal protein S12