IL_6W6K_075

3D structure

PDB id

6W6K (explore in PDB, NAKB, or RNA 3D Hub)

Description

30S-Activated-high-Mg2+

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CGGG*UUG

Length

7 nucleotides

Bulged bases

6W6K|1|A|G|926

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6W6K_075 not in the Motif Atlas

Geometric match to IL_5UNE_009

Geometric discrepancy: 0.2857

The information below is about IL_5UNE_009

Detailed Annotation

Isolated non-canonical cWW contact

Broad Annotation

No text annotation

Motif group

IL_44465.1

Basepair signature

cWW-L-R-cWW

Number of instances in this motif group

9

Unit IDs

6W6K|1|A|C|924
6W6K|1|A|G|925
6W6K|1|A|G|926
6W6K|1|A|G|927
*
6W6K|1|A|U|1390
6W6K|1|A|U|1391
6W6K|1|A|G|1392

Current chains

Chain A

16S rRNA

Nearby chains

Chain E

30S ribosomal protein S5