IL_6W7M_055

3D structure

PDB id

6W7M (explore in PDB, NAKB, or RNA 3D Hub)

Description

30S-Inactive-high-Mg2+ + carbon layer

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GGAGU*AUGAC

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6W7M_055 not in the Motif Atlas

Geometric match to IL_5J7L_338

Geometric discrepancy: 0.3332

The information below is about IL_5J7L_338

Detailed Annotation

Triple sheared

Broad Annotation

No text annotation

Motif group

IL_17948.2

Basepair signature

cWW-L-R-tSH-tHS-cWW

Number of instances in this motif group

13

Unit IDs

6W7M|1|A|G|1416
6W7M|1|A|G|1417
6W7M|1|A|A|1418
6W7M|1|A|G|1419
6W7M|1|A|U|1420
*
6W7M|1|A|A|1480
6W7M|1|A|U|1481
6W7M|1|A|G|1482
6W7M|1|A|A|1483
6W7M|1|A|C|1484

Current chains

Chain A

16S rRNA

Nearby chains