IL_6W7M_063

3D structure

PDB id

6W7M (explore in PDB, NAKB, or RNA 3D Hub)

Description

30S-Inactive-high-Mg2+ + carbon layer

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GGAG*UGAC

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6W7M_063 not in the Motif Atlas

Homologous match to IL_4LFB_060

Geometric discrepancy: 0.2421

The information below is about IL_4LFB_060

Detailed Annotation

Double sheared

Broad Annotation

Double sheared

Motif group

IL_09705.15

Basepair signature

cWW-tSH-tHS-cWW

Number of instances in this motif group

34

Unit IDs

6W7M|1|A|G|1416
6W7M|1|A|G|1417
6W7M|1|A|A|1418
6W7M|1|A|G|1419
*
6W7M|1|A|U|1481
6W7M|1|A|G|1482
6W7M|1|A|A|1483
6W7M|1|A|C|1484

Current chains

Chain A

16S rRNA

Nearby chains