IL_6WD2_128

3D structure

PDB id

6WD2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure II-A)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

AUGAAGAAG*UGUAAAGU

Length

17 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6WD2|1|3|A|408
6WD2|1|3|U|409
6WD2|1|3|G|410
6WD2|1|3|A|411
6WD2|1|3|A|412
6WD2|1|3|G|413
6WD2|1|3|A|414
6WD2|1|3|A|415
6WD2|1|3|G|416
*
6WD2|1|3|U|427
6WD2|1|3|G|428
6WD2|1|3|U|429
6WD2|1|3|A|430
6WD2|1|3|A|431
6WD2|1|3|A|432
6WD2|1|3|G|433
6WD2|1|3|U|434

Current chains

Chain 3

16S ribosomal RNA

Nearby chains

Chain I

30S ribosomal protein S4