IL_6WD6_039

3D structure

PDB id

6WD6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure II-C2)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

CCCAGACAGC*GUCGAG

Length

16 nucleotides

Bulged bases

6WD6|1|1|A|1046

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6WD6|1|1|C|1043
6WD6|1|1|C|1044
6WD6|1|1|C|1045
6WD6|1|1|A|1046
6WD6|1|1|G|1047
6WD6|1|1|A|1048
6WD6|1|1|C|1049
6WD6|1|1|A|1050
6WD6|1|1|G|1051
6WD6|1|1|C|1052
*
6WD6|1|1|G|1107
6WD6|1|1|U|1108
6WD6|1|1|C|1109
6WD6|1|1|G|1110
6WD6|1|1|A|1111
6WD6|1|1|G|1112

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain F

50S ribosomal protein L36

Chain f

50S ribosomal protein L6

Chain h

50S ribosomal protein L10