IL_6WD6_066
3D structure
- PDB id
- 6WD6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure II-C2)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- GC*GAU
- Length
- 5 nucleotides
- Bulged bases
- 6WD6|1|1|A|1981
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6WD6_066 not in the Motif Atlas
- Homologous match to IL_4WF9_068
- Geometric discrepancy: 0.1518
- The information below is about IL_4WF9_068
- Detailed Annotation
- Single bulged A
- Broad Annotation
- No text annotation
- Motif group
- IL_31462.7
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 132
Unit IDs
6WD6|1|1|G|1770
6WD6|1|1|C|1771
*
6WD6|1|1|G|1980
6WD6|1|1|A|1981
6WD6|1|1|U|1982
Current chains
- Chain 1
- 23S ribosomal RNA
Nearby chains
- Chain b
- 50S ribosomal protein L2
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