IL_6WD7_140

3D structure

PDB id

6WD7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure II-D)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

GUGAAAUCC*GAACUGC

Length

16 nucleotides

Bulged bases

6WD7|1|3|U|632

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6WD7|1|3|G|604
6WD7|1|3|U|605
6WD7|1|3|G|606
6WD7|1|3|A|607
6WD7|1|3|A|608
6WD7|1|3|A|609
6WD7|1|3|U|610
6WD7|1|3|C|611
6WD7|1|3|C|612
*
6WD7|1|3|G|628
6WD7|1|3|A|629
6WD7|1|3|A|630
6WD7|1|3|C|631
6WD7|1|3|U|632
6WD7|1|3|G|633
6WD7|1|3|C|634

Current chains

Chain 3

16S ribosomal RNA

Nearby chains

Chain I

30S ribosomal protein S4

Chain M

30S ribosomal protein S8

Chain U

30S ribosomal protein S16

Chain V

30S ribosomal protein S17