IL_6WD7_179

3D structure

PDB id

6WD7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure II-D)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

GUUGGC*GCCAUC

Length

12 nucleotides

Bulged bases

6WD7|1|1|U|1061

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6WD7|1|1|G|1059
6WD7|1|1|U|1060
6WD7|1|1|U|1061
6WD7|1|1|G|1062
6WD7|1|1|G|1063
6WD7|1|1|C|1064
*
6WD7|1|1|G|1074
6WD7|1|1|C|1075
6WD7|1|1|C|1076
6WD7|1|1|A|1077
6WD7|1|1|U|1078
6WD7|1|1|C|1079

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain h

50S ribosomal protein L10

Chain i

50S ribosomal protein L11

Chain m

50S ribosomal protein L16