3D structure

PDB id
6WD9 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure III-B)
Experimental method
ELECTRON MICROSCOPY
Resolution
3.7 Å

Loop

Sequence
GAAG*UGUGCCUUCGGGAAC
Length
19 nucleotides
Bulged bases
6WD9|1|3|U|1030, 6WD9|1|3|G|1032
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6WD9|1|3|G|1003
6WD9|1|3|A|1004
6WD9|1|3|A|1005
6WD9|1|3|G|1006
*
6WD9|1|3|U|1023
6WD9|1|3|G|1024
6WD9|1|3|U|1025
6WD9|1|3|G|1026
6WD9|1|3|C|1027
6WD9|1|3|C|1028
6WD9|1|3|U|1029
6WD9|1|3|U|1030
6WD9|1|3|C|1031
6WD9|1|3|G|1032
6WD9|1|3|G|1033
6WD9|1|3|G|1034
6WD9|1|3|A|1035
6WD9|1|3|A|1036
6WD9|1|3|C|1037

Current chains

Chain 3
16S ribosomal RNA

Nearby chains

Chain S
30S ribosomal protein S14

Coloring options:

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