IL_6WDA_157
3D structure
- PDB id
- 6WDA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure III-C)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- CUG*CAAG
- Length
- 7 nucleotides
- Bulged bases
- 6WDA|1|3|A|1196
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6WDA_157 not in the Motif Atlas
- Geometric match to IL_7A0S_031
- Geometric discrepancy: 0.1723
- The information below is about IL_7A0S_031
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_87907.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 179
Unit IDs
6WDA|1|3|C|1059
6WDA|1|3|U|1060
6WDA|1|3|G|1061
*
6WDA|1|3|C|1195
6WDA|1|3|A|1196
6WDA|1|3|A|1197
6WDA|1|3|G|1198
Current chains
- Chain 3
- 16S ribosomal RNA
Nearby chains
- Chain 4
- mRNA
- Chain 7
- Transfer RNA; tRNA
- Chain H
- 30S ribosomal protein S3
- Chain J
- 30S ribosomal protein S5
- Chain O
- 30S ribosomal protein S10
- Chain S
- 30S ribosomal protein S14
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