IL_6WDA_174
3D structure
- PDB id
- 6WDA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure III-C)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- UUAAC*GAGG
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6WDA_174 not in the Motif Atlas
- Geometric match to IL_7RQB_109
- Geometric discrepancy: 0.3258
- The information below is about IL_7RQB_109
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_58764.3
- Basepair signature
- cWW-L-R-L-R-L-cWW
- Number of instances in this motif group
- 11
Unit IDs
6WDA|1|3|U|1444
6WDA|1|3|U|1445
6WDA|1|3|A|1446
6WDA|1|3|A|1447
6WDA|1|3|C|1448
*
6WDA|1|3|G|1455
6WDA|1|3|A|1456
6WDA|1|3|G|1457
6WDA|1|3|G|1458
Current chains
- Chain 3
- 16S ribosomal RNA
Nearby chains
- Chain Y
- 30S ribosomal protein S20
Coloring options: