IL_6WDA_177

3D structure

PDB id

6WDA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure III-C)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

UGUUAG*CAAAAAUG

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6WDA|1|1|U|290
6WDA|1|1|G|291
6WDA|1|1|U|292
6WDA|1|1|U|293
6WDA|1|1|A|294
6WDA|1|1|G|295
*
6WDA|1|1|C|343
6WDA|1|1|A|344
6WDA|1|1|A|345
6WDA|1|1|A|346
6WDA|1|1|A|347
6WDA|1|1|A|348
6WDA|1|1|U|349
6WDA|1|1|G|350

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain u

50S ribosomal protein L24