IL_6WDD_147
3D structure
- PDB id
- 6WDD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-A)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- CAAAC*GGUAG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6WDD_147 not in the Motif Atlas
- Homologous match to IL_4LFB_033
- Geometric discrepancy: 0.0999
- The information below is about IL_4LFB_033
- Detailed Annotation
- tSH-tHW-tHS
- Broad Annotation
- No text annotation
- Motif group
- IL_05821.1
- Basepair signature
- cWW-tSH-tHW-tHS-cWW
- Number of instances in this motif group
- 17
Unit IDs
6WDD|1|3|C|779
6WDD|1|3|A|780
6WDD|1|3|A|781
6WDD|1|3|A|782
6WDD|1|3|C|783
*
6WDD|1|3|G|799
6WDD|1|3|G|800
6WDD|1|3|U|801
6WDD|1|3|A|802
6WDD|1|3|G|803
Current chains
- Chain 3
- 16S ribosomal RNA
Nearby chains
- Chain 1
- Large subunit ribosomal RNA; LSU rRNA
- Chain P
- 30S ribosomal protein S11
- Chain Z
- 30S ribosomal protein S21
Coloring options: