3D structure

PDB id
6WDG (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure VI-B)
Experimental method
ELECTRON MICROSCOPY
Resolution
3.3 Å

Loop

Sequence
GAAG*UGUGCCUUCGGGAAC
Length
19 nucleotides
Bulged bases
None detected
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6WDG|1|3|G|1003
6WDG|1|3|A|1004
6WDG|1|3|A|1005
6WDG|1|3|G|1006
*
6WDG|1|3|U|1023
6WDG|1|3|G|1024
6WDG|1|3|U|1025
6WDG|1|3|G|1026
6WDG|1|3|C|1027
6WDG|1|3|C|1028
6WDG|1|3|U|1029
6WDG|1|3|U|1030
6WDG|1|3|C|1031
6WDG|1|3|G|1032
6WDG|1|3|G|1033
6WDG|1|3|G|1034
6WDG|1|3|A|1035
6WDG|1|3|A|1036
6WDG|1|3|C|1037

Current chains

Chain 3
16S ribosomal RNA

Nearby chains

Chain H
30S ribosomal protein S3
Chain S
30S ribosomal protein S14

Coloring options:

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