3D structure

PDB id
6WDJ (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Non-cognate Structure V-A1)
Experimental method
ELECTRON MICROSCOPY
Resolution
3.7 Å

Loop

Sequence
GUGUAAGC*GUUGAGC
Length
15 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6WDJ|1|1|G|2846
6WDJ|1|1|U|2847
6WDJ|1|1|G|2848
6WDJ|1|1|U|2849
6WDJ|1|1|A|2850
6WDJ|1|1|A|2851
6WDJ|1|1|G|2852
6WDJ|1|1|C|2853
*
6WDJ|1|1|G|2864
6WDJ|1|1|U|2865
6WDJ|1|1|U|2866
6WDJ|1|1|G|2867
6WDJ|1|1|A|2868
6WDJ|1|1|G|2869
6WDJ|1|1|C|2870

Current chains

Chain 1
23S ribosomal RNA

Nearby chains

Chain n
50S ribosomal protein L17
Chain p
50S ribosomal protein L19

Coloring options:

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