IL_6WDJ_184
3D structure
- PDB id
- 6WDJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Non-cognate Structure V-A1)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- GGAGGCUUUGAAGU*AUGGAGCCGACCUUGAAAUAC
- Length
- 35 nucleotides
- Bulged bases
- 6WDJ|1|1|U|2132, 6WDJ|1|1|G|2133, 6WDJ|1|1|A|2163, 6WDJ|1|1|C|2164, 6WDJ|1|1|A|2171, 6WDJ|1|1|U|2172
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6WDJ|1|1|G|2124
6WDJ|1|1|G|2125
6WDJ|1|1|A|2126
6WDJ|1|1|G|2127
6WDJ|1|1|G|2128
6WDJ|1|1|C|2129
6WDJ|1|1|U|2130
6WDJ|1|1|U|2131
6WDJ|1|1|U|2132
6WDJ|1|1|G|2133
6WDJ|1|1|A|2134
6WDJ|1|1|A|2135
6WDJ|1|1|G|2136
6WDJ|1|1|U|2137
*
6WDJ|1|1|A|2154
6WDJ|1|1|U|2155
6WDJ|1|1|G|2156
6WDJ|1|1|G|2157
6WDJ|1|1|A|2158
6WDJ|1|1|G|2159
6WDJ|1|1|C|2160
6WDJ|1|1|C|2161
6WDJ|1|1|G|2162
6WDJ|1|1|A|2163
6WDJ|1|1|C|2164
6WDJ|1|1|C|2165
6WDJ|1|1|U|2166
6WDJ|1|1|U|2167
6WDJ|1|1|G|2168
6WDJ|1|1|A|2169
6WDJ|1|1|A|2170
6WDJ|1|1|A|2171
6WDJ|1|1|U|2172
6WDJ|1|1|A|2173
6WDJ|1|1|C|2174
Current chains
- Chain 1
- 23S ribosomal RNA
Nearby chains
- Chain 6
- Transfer RNA; tRNA
- Chain a
- 50S ribosomal protein L1
Coloring options: