IL_6WDK_059
3D structure
- PDB id
- 6WDK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Non-cognate Structure V-A2)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- GAGAAC*GAC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6WDK_059 not in the Motif Atlas
- Homologous match to IL_5J7L_304
- Geometric discrepancy: 0.1186
- The information below is about IL_5J7L_304
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_12566.4
- Basepair signature
- cWW-L-tHS-L-cWW-L
- Number of instances in this motif group
- 5
Unit IDs
6WDK|1|1|G|1651
6WDK|1|1|A|1652
6WDK|1|1|G|1653
6WDK|1|1|A|1654
6WDK|1|1|A|1655
6WDK|1|1|C|1656
*
6WDK|1|1|G|2004
6WDK|1|1|A|2005
6WDK|1|1|C|2006
Current chains
- Chain 1
- 23S ribosomal RNA
Nearby chains
- Chain c
- 50S ribosomal protein L3
- Chain n
- 50S ribosomal protein L17
Coloring options: