IL_6WDK_179

3D structure

PDB id

6WDK (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Non-cognate Structure V-A2)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CGAGGC*GCUGAAG

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6WDK|1|1|C|1526
6WDK|1|1|G|1527
6WDK|1|1|A|1528
6WDK|1|1|G|1529
6WDK|1|1|G|1530
6WDK|1|1|C|1531
*
6WDK|1|1|G|1540
6WDK|1|1|C|1541
6WDK|1|1|U|1542
6WDK|1|1|G|1543
6WDK|1|1|A|1544
6WDK|1|1|A|1545
6WDK|1|1|G|1546

Current chains

Chain 1

23S ribosomal RNA

Nearby chains