3D structure

PDB id
6WDL (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Non-cognate Structure V-B1)
Experimental method
ELECTRON MICROSCOPY
Resolution
3.7 Å

Loop

Sequence
GAAG*UGUGCCUUCGGGAAC
Length
19 nucleotides
Bulged bases
6WDL|1|3|U|1030, 6WDL|1|3|G|1032
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6WDL|1|3|G|1003
6WDL|1|3|A|1004
6WDL|1|3|A|1005
6WDL|1|3|G|1006
*
6WDL|1|3|U|1023
6WDL|1|3|G|1024
6WDL|1|3|U|1025
6WDL|1|3|G|1026
6WDL|1|3|C|1027
6WDL|1|3|C|1028
6WDL|1|3|U|1029
6WDL|1|3|U|1030
6WDL|1|3|C|1031
6WDL|1|3|G|1032
6WDL|1|3|G|1033
6WDL|1|3|G|1034
6WDL|1|3|A|1035
6WDL|1|3|A|1036
6WDL|1|3|C|1037

Current chains

Chain 3
16S ribosomal RNA

Nearby chains

Chain S
30S ribosomal protein S14

Coloring options:

Copyright 2025 BGSU RNA group. Page generated in 0.1202 s