IL_6WDM_188

3D structure

PDB id

6WDM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Non-cognate Structure V-B2)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GAAG*UGUGCCUUCGGGAAC

Length

19 nucleotides

Bulged bases

6WDM|1|3|U|1030, 6WDM|1|3|G|1032

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6WDM|1|3|G|1003
6WDM|1|3|A|1004
6WDM|1|3|A|1005
6WDM|1|3|G|1006
*
6WDM|1|3|U|1023
6WDM|1|3|G|1024
6WDM|1|3|U|1025
6WDM|1|3|G|1026
6WDM|1|3|C|1027
6WDM|1|3|C|1028
6WDM|1|3|U|1029
6WDM|1|3|U|1030
6WDM|1|3|C|1031
6WDM|1|3|G|1032
6WDM|1|3|G|1033
6WDM|1|3|G|1034
6WDM|1|3|A|1035
6WDM|1|3|A|1036
6WDM|1|3|C|1037

Current chains

Chain 3

16S ribosomal RNA

Nearby chains

Chain S

30S ribosomal protein S14