IL_6WDR_084

3D structure

PDB id

6WDR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Subunit joining exposes nascent pre-40S rRNA for processing and quality control

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

UACCGAU*GAGGAA

Length

13 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6WDR|1|2|U|1802
6WDR|1|2|A|1803
6WDR|1|2|C|1804
6WDR|1|2|C|1805
6WDR|1|2|G|1806
6WDR|1|2|A|1807
6WDR|1|2|U|1808
*
6WDR|1|2|G|1897
6WDR|1|2|A|1898
6WDR|1|2|G|1899
6WDR|1|2|G|1900
6WDR|1|2|A|1901
6WDR|1|2|A|1902

Current chains

Chain 2

20S ribosomal RNA

Nearby chains

Chain X

40S ribosomal protein S23-A