IL_6WNV_045

3D structure

PDB id

6WNV (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome without free 5S rRNA and with a perturbed PTC

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GAAG*UGUGCCUUCGGGAAC

Length

19 nucleotides

Bulged bases

6WNV|1|3|U|1025

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6WNV|1|3|G|1003
6WNV|1|3|A|1004
6WNV|1|3|A|1005
6WNV|1|3|G|1006
*
6WNV|1|3|U|1023
6WNV|1|3|G|1024
6WNV|1|3|U|1025
6WNV|1|3|G|1026
6WNV|1|3|C|1027
6WNV|1|3|C|1028
6WNV|1|3|U|1029
6WNV|1|3|U|1030
6WNV|1|3|C|1031
6WNV|1|3|G|1032
6WNV|1|3|G|1033
6WNV|1|3|G|1034
6WNV|1|3|A|1035
6WNV|1|3|A|1036
6WNV|1|3|C|1037

Current chains

Chain 3

16S ribosomal RNA

Nearby chains

Chain S

30S ribosomal protein S14