IL_6WNV_141
3D structure
- PDB id
- 6WNV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome without free 5S rRNA and with a perturbed PTC
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- UUAG*CGAAG
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6WNV_141 not in the Motif Atlas
- Geometric match to IL_4WF9_075
- Geometric discrepancy: 0.2007
- The information below is about IL_4WF9_075
- Detailed Annotation
- UAA/GAN variation
- Broad Annotation
- UAA/GAN variation
- Motif group
- IL_77691.7
- Basepair signature
- cWW-tSH-L-R-L-cWW
- Number of instances in this motif group
- 7
Unit IDs
6WNV|1|4|U|1992
6WNV|1|4|U|1993
6WNV|1|4|A|1994
6WNV|1|4|G|1995
*
6WNV|1|4|C|2002
6WNV|1|4|G|2003
6WNV|1|4|A|2004
6WNV|1|4|A|2005
6WNV|1|4|G|2006
Current chains
- Chain 4
- 23s-5s joint ribosomal RNA
Nearby chains
- Chain a
- 50S ribosomal protein L1
Coloring options: