IL_6WNV_150

3D structure

PDB id

6WNV (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome without free 5S rRNA and with a perturbed PTC

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GCCU*AUGU

Length

8 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6WNV|1|4|G|2230
6WNV|1|4|C|2231
6WNV|1|4|C|2232
6WNV|1|4|U|2233
*
6WNV|1|4|A|2312
6WNV|1|4|U|2313
6WNV|1|4|G|2314
6WNV|1|4|U|2315

Current chains

Chain 4

23s-5s joint ribosomal RNA

Nearby chains

Chain a

50S ribosomal protein L1

Chain g

50S ribosomal protein L9