IL_6WNW_075

3D structure

PDB id

6WNW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Active 70S ribosome without free 5S rRNA and bound with A- and P- tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CCUGAAUC*GUGAG

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6WNW_075 not in the Motif Atlas

Geometric match to IL_5J7L_253

Geometric discrepancy: 0.2491

The information below is about IL_5J7L_253

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_77870.1

Basepair signature

cWW-L-R-L-tHS-L-cWW-L-cWW

Number of instances in this motif group

2

Unit IDs

6WNW|1|4|C|274
6WNW|1|4|C|275
6WNW|1|4|U|276
6WNW|1|4|G|277
6WNW|1|4|A|278
6WNW|1|4|A|279
6WNW|1|4|U|280
6WNW|1|4|C|281
*
6WNW|1|4|G|359
6WNW|1|4|U|360
6WNW|1|4|G|361
6WNW|1|4|A|362
6WNW|1|4|G|363

Current chains

Chain 4

23s-5s joint ribosomal RNA

Nearby chains