IL_6WNW_097

3D structure

PDB id

6WNW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Active 70S ribosome without free 5S rRNA and bound with A- and P- tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GG*UAC

Length

5 nucleotides

Bulged bases

6WNW|1|4|A|896

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6WNW_097 not in the Motif Atlas

Geometric match to IL_8C3A_400

Geometric discrepancy: 0.3132

The information below is about IL_8C3A_400

Detailed Annotation

Multiple bulged bases

Broad Annotation

No text annotation

Motif group

IL_82107.2

Basepair signature

cWW-cWW

Number of instances in this motif group

34

Unit IDs

6WNW|1|4|G|880
6WNW|1|4|G|881
*
6WNW|1|4|U|895
6WNW|1|4|A|896
6WNW|1|4|C|897

Current chains

Chain 4

23s-5s joint ribosomal RNA

Nearby chains

Chain 7

Transfer RNA; tRNA