IL_6WNW_122

3D structure

PDB id

6WNW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Active 70S ribosome without free 5S rRNA and bound with A- and P- tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CGAAG*CUAAG

Length

10 nucleotides

Bulged bases

6WNW|1|4|A|1548

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6WNW_122 not in the Motif Atlas

Geometric match to IL_5J7L_295

Geometric discrepancy: 0.1049

The information below is about IL_5J7L_295

Detailed Annotation

UAA/GAN

Broad Annotation

No text annotation

Motif group

IL_38507.2

Basepair signature

cWW-tWH-L-tHS-cWW

Number of instances in this motif group

16

Unit IDs

6WNW|1|4|C|1545
6WNW|1|4|G|1546
6WNW|1|4|A|1547
6WNW|1|4|A|1548
6WNW|1|4|G|1549
*
6WNW|1|4|C|1705
6WNW|1|4|U|1706
6WNW|1|4|A|1707
6WNW|1|4|A|1708
6WNW|1|4|G|1709

Current chains

Chain 4

23s-5s joint ribosomal RNA

Nearby chains