IL_6WNW_134
3D structure
- PDB id
- 6WNW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Active 70S ribosome without free 5S rRNA and bound with A- and P- tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- ACUAGG*CUGU
- Length
- 10 nucleotides
- Bulged bases
- 6WNW|1|4|G|2120
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6WNW_134 not in the Motif Atlas
- Geometric match to IL_5J7L_307
- Geometric discrepancy: 0.0905
- The information below is about IL_5J7L_307
- Detailed Annotation
- Intercalated tWH
- Broad Annotation
- Intercalated tWH
- Motif group
- IL_76758.2
- Basepair signature
- cWW-L-R-L-cWW-L-L
- Number of instances in this motif group
- 7
Unit IDs
6WNW|1|4|A|1797
6WNW|1|4|C|1798
6WNW|1|4|U|1799
6WNW|1|4|A|1800
6WNW|1|4|G|1801
6WNW|1|4|G|1802
*
6WNW|1|4|C|2118
6WNW|1|4|U|2119
6WNW|1|4|G|2120
6WNW|1|4|U|2121
Current chains
- Chain 4
- 23s-5s joint ribosomal RNA
Nearby chains
- Chain c
- 50S ribosomal protein L3
- Chain k
- 50S ribosomal protein L14
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